imputation.hpp File Reference

#include <cstdio>
#include <iostream>
#include <ctime>
#include <unistd.h>
#include <fstream>
#include <ostream>
#include "prog_args.hpp"
#include "input_prep.hpp"
#include "hidden_markov_model.hpp"
#include "recombination.hpp"
#include "dosage_writer.hpp"
#include <savvy/reader.hpp>
#include <savvy/writer.hpp>
#include <omp.hpp>

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Classes
class	imputation
	Class responsible for managing genotype imputation statistics and timing. More...